STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0396Hypothetical protein. (147 aa)    
Predicted Functional Partners:
amb0397
Hypothetical protein.
       0.773
amb0385
Phage-related minor tail protein.
 
   
 0.677
amb0394
Hypothetical protein.
  
  
 0.626
amb4275
Hypothetical protein.
  
  
 0.615
amb4270
Hypothetical protein.
 
     0.607
amb0395
Phage-related protein; Tail component.
       0.606
amb4269
Hypothetical protein.
 
     0.602
amb4233
Hypothetical protein.
  
     0.559
amb0383
Hypothetical protein.
 
     0.539
amb0392
Hypothetical protein.
       0.495
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.