Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb0432SAM-dependent methyltransferase. (330 aa)    
Predicted Functional Partners:
amb1990
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.589
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.576
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
     
 0.546
amb1042
CheY-like receiver.
 
  
 0.523
amb3878
Sensor protein gacS.
     
 0.521
amb2972
Acyl-CoA synthetase/AMP-acid ligase II.
     
 0.520
amb1830
Arsenite efflux pump ACR3 and related permease.
  
  
 0.513
amb0433
Surface lipoprotein.
       0.503
amb0434
ABC-type transport system; Involved in resistance to organic solvents, auxiliary component.
  
    0.503
amb1829
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.489
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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