STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0495DNA polymerase III; Gamma/tau subunits. (586 aa)    
Predicted Functional Partners:
amb0497
Flagellar GTP-binding protein.
 
     0.930
amb0496
ATPase involved in chromosome partitioning.
 
     0.916
amb0501
FlbE protein.
 
     0.871
amb3188
Hypothetical protein.
  
     0.774
amb3189
Hypothetical protein.
  
     0.774
amb0319
Hypothetical protein.
  
     0.769
amb0021
Hypothetical protein.
  
     0.746
amb1418
Predicted membrane protein.
  
     0.746
amb2364
Hypothetical 288 kDa protein in nifR3-like 5'region.
  
     0.746
amb1287
Lysophospholipase.
  
     0.744
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.