STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0517Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (200 aa)    
Predicted Functional Partners:
amb2218
Thiol-disulfide isomerase and thioredoxins.
 
 
 0.811
amb3089
Uncharacterized protein conserved in bacteria.
 
   
 0.811
amb3088
Thiol-disulfide isomerase and thioredoxins.
 
 
 0.802
ctaG
Cytochrome c oxidase assembly protein ctaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.778
amb0516
Uncharacterized conserved protein.
       0.776
amb0515
Uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
       0.736
amb0514
Precorrin-4 methylase.
       0.727
amb2221
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
 
 
 0.707
amb2308
ABC-type Zn2+ transport system, periplasmic component/surface adhesin.
 
      0.699
amb2170
Heme/copper-type cytochrome/quinol oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.696
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.