STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0535ATPase components of various ABC-type transport systems; Contain duplicated ATPase. (553 aa)    
Predicted Functional Partners:
amb0537
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
 0.999
amb0536
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
 
 0.998
amb0531
Anaerobic dehydrogenase; Typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.984
amb0534
ABC-type nitrate/sulfonate/bicarbonate transport systems; Periplasmic component.
 
 0.963
napA
Anaerobic dehydrogenase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.905
amb2687
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
     
  0.900
amb0183
ABC-type multidrug transport system; Permease component.
      0.891
amb1859
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
 
 
 0.835
amb1855
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.816
amb1864
ABC-type nitrate/sulfonate/bicarbonate transport system; Permease component.
 
 
 0.777
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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