Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amb0205 | amb0544 | amb0205 | amb0544 | Uncharacterized protein; Conserved in bacteria. | Uncharacterized conserved protein. | 0.658 |
amb0205 | amb1358 | amb0205 | amb1358 | Uncharacterized protein; Conserved in bacteria. | Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis. | 0.482 |
amb0421 | amb0543 | amb0421 | amb0543 | Inactivated superfamily I helicase. | Uncharacterized protein; Conserved in bacteria. | 0.663 |
amb0421 | amb0544 | amb0421 | amb0544 | Inactivated superfamily I helicase. | Uncharacterized conserved protein. | 0.540 |
amb0421 | amb1342 | amb0421 | amb1342 | Inactivated superfamily I helicase. | Uncharacterized protein; Conserved in bacteria. | 0.723 |
amb0421 | amb1358 | amb0421 | amb1358 | Inactivated superfamily I helicase. | Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis. | 0.516 |
amb0421 | amb2296 | amb0421 | amb2296 | Inactivated superfamily I helicase. | Uncharacterized protein conserved in bacteria. | 0.728 |
amb0421 | amb3914 | amb0421 | amb3914 | Inactivated superfamily I helicase. | DnaJ-class molecular chaperone. | 0.673 |
amb0421 | secE | amb0421 | amb3147 | Inactivated superfamily I helicase. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. | 0.553 |
amb0543 | amb0421 | amb0543 | amb0421 | Uncharacterized protein; Conserved in bacteria. | Inactivated superfamily I helicase. | 0.663 |
amb0543 | amb0544 | amb0543 | amb0544 | Uncharacterized protein; Conserved in bacteria. | Uncharacterized conserved protein. | 0.719 |
amb0543 | amb1342 | amb0543 | amb1342 | Uncharacterized protein; Conserved in bacteria. | Uncharacterized protein; Conserved in bacteria. | 0.473 |
amb0543 | amb1358 | amb0543 | amb1358 | Uncharacterized protein; Conserved in bacteria. | Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis. | 0.620 |
amb0543 | proC | amb0543 | amb0545 | Uncharacterized protein; Conserved in bacteria. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.616 |
amb0544 | amb0205 | amb0544 | amb0205 | Uncharacterized conserved protein. | Uncharacterized protein; Conserved in bacteria. | 0.658 |
amb0544 | amb0421 | amb0544 | amb0421 | Uncharacterized conserved protein. | Inactivated superfamily I helicase. | 0.540 |
amb0544 | amb0543 | amb0544 | amb0543 | Uncharacterized conserved protein. | Uncharacterized protein; Conserved in bacteria. | 0.719 |
amb0544 | amb1342 | amb0544 | amb1342 | Uncharacterized conserved protein. | Uncharacterized protein; Conserved in bacteria. | 0.531 |
amb0544 | amb1358 | amb0544 | amb1358 | Uncharacterized conserved protein. | Uncharacterized protein; Related to arylsulfate sulfotransferase involved in siderophore biosynthesis. | 0.676 |
amb0544 | amb2296 | amb0544 | amb2296 | Uncharacterized conserved protein. | Uncharacterized protein conserved in bacteria. | 0.561 |
page 1 of 3