STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mms16Magnetic particle membrane specific GTPase P16. (145 aa)    
Predicted Functional Partners:
amb0841
Poly-beta-hydroxybutyrate polymerase; phbC homolog.
 
  
 0.688
amb3515
Hypothetical protein.
  
     0.631
amb4275
Hypothetical protein.
  
     0.630
amb1121
Magnetic particle membrane specific GTPase P16.
  
     0.586
amb0592
Hypothetical protein.
 
     0.569
amb4281
Hypothetical protein.
  
     0.554
amb3935
Uncharacterized protein conserved in bacteria.
 
     0.551
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.534
amb3875
Hypothetical protein.
  
     0.534
amb4270
Hypothetical protein.
  
     0.530
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.