Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb0548Signal transduction histidine kinase. (441 aa)    
Predicted Functional Partners:
amb0549
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.994
amb0547
ATPase involved in chromosome partitioning.
       0.773
amb3401
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.757
amb2293
Signal transduction histidine kinase.
  
 
 0.756
amb1335
Response regulator; Consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.751
amb3344
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 
 0.741
amb1110
Signal transduction histidine kinase.
  
 
 0.733
ilvE
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 0.721
amb0550
Transcriptional regulator.
  
  
 0.699
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
 
 0.690
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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