STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0576Predicted UDP-glucose 6-dehydrogenase. (435 aa)    
Predicted Functional Partners:
amb0139
Nucleoside-diphosphate-sugar epimerase.
 0.994
amb0577
UDP-glucose pyrophosphorylase.
  
 0.990
amb0059
dTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.978
amb2159
Nucleoside-diphosphate-sugar epimerase.
 0.975
amb4451
UDP-glucose pyrophosphorylase.
  
 0.960
amb0061
UDP-glucose 4-epimerase.
 0.959
amb0037
Xanthan biosynthesis protein xanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.951
amb0084
Nucleoside-diphosphate-sugar epimerase.
 
 0.939
amb1445
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.930
amb0056
Nucleoside-diphosphate-sugar epimerase.
  
 0.929
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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