Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amb0592 | amb0593 | amb0592 | amb0593 | Hypothetical protein. | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.837 |
amb0592 | amb0594 | amb0592 | amb0594 | Hypothetical protein. | Uncharacterized conserved protein. | 0.828 |
amb0592 | amb0597 | amb0592 | amb0597 | Hypothetical protein. | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | 0.430 |
amb0592 | hldD | amb0592 | amb0596 | Hypothetical protein. | Nucleoside-diphosphate-sugar epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.693 |
amb0592 | lgt | amb0592 | amb0595 | Hypothetical protein. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.642 |
amb0593 | amb0592 | amb0593 | amb0592 | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Hypothetical protein. | 0.837 |
amb0593 | amb0594 | amb0593 | amb0594 | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Uncharacterized conserved protein. | 0.880 |
amb0593 | amb0597 | amb0593 | amb0597 | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | 0.442 |
amb0593 | hldD | amb0593 | amb0596 | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Nucleoside-diphosphate-sugar epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.642 |
amb0593 | lgt | amb0593 | amb0595 | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.645 |
amb0594 | amb0592 | amb0594 | amb0592 | Uncharacterized conserved protein. | Hypothetical protein. | 0.828 |
amb0594 | amb0593 | amb0594 | amb0593 | Uncharacterized conserved protein. | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.880 |
amb0594 | amb0597 | amb0594 | amb0597 | Uncharacterized conserved protein. | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | 0.446 |
amb0594 | hldD | amb0594 | amb0596 | Uncharacterized conserved protein. | Nucleoside-diphosphate-sugar epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.645 |
amb0594 | lgt | amb0594 | amb0595 | Uncharacterized conserved protein. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.721 |
amb0597 | amb0592 | amb0597 | amb0592 | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | Hypothetical protein. | 0.430 |
amb0597 | amb0593 | amb0597 | amb0593 | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | Uncharacterized conserved protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.442 |
amb0597 | amb0594 | amb0597 | amb0594 | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | Uncharacterized conserved protein. | 0.446 |
amb0597 | hldD | amb0597 | amb0596 | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | Nucleoside-diphosphate-sugar epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.656 |
amb0597 | lgt | amb0597 | amb0595 | Predicted hydrolase or acyltransferase; Alpha/beta hydrolase superfamily; Belongs to the peptidase S33 family. | Prolipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.655 |
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