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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0606Uncharacterized protein; Containing LysM domain. (314 aa)    
Predicted Functional Partners:
amb1894
Phage baseplate assembly protein W.
  
   0.882
amb1896
Hypothetical protein.
  
 
 0.860
amb1897
Hypothetical protein.
  
 
 0.860
amb0376
Hypothetical protein.
  
 
 0.834
amb1173
Hypothetical protein.
  
 
 0.834
amb1884
Phage tail sheath protein FI.
  
 
 0.834
amb1885
Hypothetical protein.
  
   0.818
amb1891
Phage protein D.
  
   0.805
amb4558
Hypothetical protein.
  
  
 0.778
amb4017
Multimeric flavodoxin WrbA.
  
  
 0.693
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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