STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
amb0613Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB. (117 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthesis pathway; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
    0.918
amb0611
Hypothetical protein CC0952.
       0.815
amb0612
Hypothetical protein.
       0.781
amb0615
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
     0.732
amb0618
Flagellar biosynthesis pathway; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
 
    0.726
fliQ
Flagellar biosynthesis pathway; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
    0.674
amb0614
Flagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
     
 0.664
amb0500
Flagellar motor switch/type III secretory pathway protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.657
flhA
Flagellar biosynthesis pathway; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.641
amb0628
Flagellar biosynthesis/type III secretory pathway ATPase.
 
  
 0.586
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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