STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0664Peroxiredoxin; Msp3. (207 aa)    
Predicted Functional Partners:
amb0663
Thioredoxin reductase.
  
 
 0.917
amb2684
Peroxiredoxin.
 
 
 0.837
amb3892
Thioredoxin reductase.
  
 
 0.830
amb2978
Cu/Zn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.814
amb2218
Thiol-disulfide isomerase and thioredoxins.
  
 0.804
amb2749
Thiol-disulfide isomerase and thioredoxins.
  
 0.804
amb3088
Thiol-disulfide isomerase and thioredoxins.
  
 0.804
amb4201
Thiol-disulfide isomerase and thioredoxins.
  
 0.804
amb3627
Phospholipid hydroperoxide glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.758
amb2511
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.723
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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