STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0685Uncharacterized protein; Conserved in bacteria. (666 aa)    
Predicted Functional Partners:
amb0684
Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.871
amb0688
TPR repeat.
  
  
 0.815
amb0687
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
       0.791
amb0686
Hypothetical protein.
       0.773
amb3828
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.726
amb2214
Hypothetical protein SO0736 precursor.
  
 
   0.593
amb3279
Hypothetical protein.
  
     0.592
amb2123
Integrase; Belongs to the 'phage' integrase family.
  
     0.539
amb0714
Spore coat polysaccharide biosynthesis protein.
 
   
 0.524
amb0713
Sialic acid synthase.
 
  
 0.501
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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