Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb0684 | amb0685 | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Uncharacterized protein; Conserved in bacteria. | 0.871 |
amb0684 | amb0686 | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Hypothetical protein. | 0.451 |
amb0684 | amb0687 | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Predicted O-linked N-acetylglucosamine transferase; SPINDLY family. | 0.470 |
amb0684 | amb0688 | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | TPR repeat. | 0.603 |
amb0684 | amb3828 | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.411 |
amb0685 | amb0684 | Uncharacterized protein; Conserved in bacteria. | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.871 |
amb0685 | amb0686 | Uncharacterized protein; Conserved in bacteria. | Hypothetical protein. | 0.773 |
amb0685 | amb0687 | Uncharacterized protein; Conserved in bacteria. | Predicted O-linked N-acetylglucosamine transferase; SPINDLY family. | 0.791 |
amb0685 | amb0688 | Uncharacterized protein; Conserved in bacteria. | TPR repeat. | 0.815 |
amb0685 | amb0713 | Uncharacterized protein; Conserved in bacteria. | Sialic acid synthase. | 0.501 |
amb0685 | amb0714 | Uncharacterized protein; Conserved in bacteria. | Spore coat polysaccharide biosynthesis protein. | 0.524 |
amb0685 | amb2123 | Uncharacterized protein; Conserved in bacteria. | Integrase; Belongs to the 'phage' integrase family. | 0.539 |
amb0685 | amb2214 | Uncharacterized protein; Conserved in bacteria. | Hypothetical protein SO0736 precursor. | 0.593 |
amb0685 | amb3279 | Uncharacterized protein; Conserved in bacteria. | Hypothetical protein. | 0.592 |
amb0685 | amb3828 | Uncharacterized protein; Conserved in bacteria. | Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.726 |
amb0686 | amb0684 | Hypothetical protein. | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.451 |
amb0686 | amb0685 | Hypothetical protein. | Uncharacterized protein; Conserved in bacteria. | 0.773 |
amb0686 | amb0687 | Hypothetical protein. | Predicted O-linked N-acetylglucosamine transferase; SPINDLY family. | 0.773 |
amb0686 | amb0688 | Hypothetical protein. | TPR repeat. | 0.773 |
amb0687 | amb0684 | Predicted O-linked N-acetylglucosamine transferase; SPINDLY family. | Flagellin and related hook-associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.470 |
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