STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0707Signal transduction histidine kinase. (557 aa)    
Predicted Functional Partners:
amb2979
FOG: CheY-like receiver.
  
 
   0.799
amb3470
FOG: CheY-like receiver.
  
     0.771
amb2643
FOG: CheY-like receiver.
  
     0.770
amb1431
CheY-like receiver.
  
     0.766
amb0708
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
       0.548
amb3537
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 
 0.519
amb1110
Signal transduction histidine kinase.
  
 
 0.486
amb2293
Signal transduction histidine kinase.
   
 
 0.475
amb2930
Sensor protein barA.
  
 
 0.474
amb1432
Signal transduction histidine kinase.
  
 
 0.461
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.