Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb0723Hemerythrin; FOG: CheY-like receiver. (275 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
  
 
 0.820
amb3966
Hemerythrin-like protein PA1673.
  
     0.773
amb1415
Hemerythrin-like protein PA1673.
  
     0.772
amb2239
Hemerythrin-like protein PA1673.
  
     0.770
amb0985
Hemerythrin-like protein PA1673.
  
     0.767
amb4136
Hemerythrin-like protein RSc0777.
  
     0.763
amb0871
Hypothetical protein.
  
     0.762
amb1112
Signal transduction histidine kinase.
  
 
 0.754
amb3498
Flagellar motor switch protein fliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.740
amb1841
Hypothetical protein.
  
 
 0.715
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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