STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0773ABC-type multidrug transport system, permease component. (266 aa)    
Predicted Functional Partners:
amb0774
ABC-type Na+ transport system; ATPase component.
 
  
 0.976
amb1227
Nitroreductase.
  
  
 0.664
amb0775
Hypothetical protein.
       0.564
amb3623
ABC-type multidrug transport system, ATPase component.
 
  
 0.543
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
  
 0.534
amb1979
ABC-type dipeptide transport system; Periplasmic component.
  
  
 0.507
amb0776
Hypothetical protein.
       0.502
amb3973
Chorismate mutase.
  
     0.472
amb0182
ABC-type multidrug transport system; ATPase component.
  
  
 0.468
amb4213
ABC-type multidrug transport system, ATPase component; ABC-type uncharacterized transport system, ATPase component.
  
  
 0.468
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.