Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb0774ABC-type Na+ transport system; ATPase component. (181 aa)    
Predicted Functional Partners:
amb0773
ABC-type multidrug transport system, permease component.
 
  
 0.976
amb0183
ABC-type multidrug transport system; Permease component.
 
  
 0.945
amb3623
ABC-type multidrug transport system, ATPase component.
 
    
0.864
amb1476
ABC-type branched-chain amino acid transport systems; ATPase component.
    
0.860
amb2604
ABC-type branched-chain amino acid transport systems, ATPase component.
    
0.804
amb3076
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.687
potA
ABC-type spermidine/putrescine transport systems; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
    
0.615
amb2027
ABC-type branched-chain amino acid transport systems, ATPase component.
    
0.577
amb0775
Hypothetical protein.
       0.576
amb0776
Hypothetical protein.
       0.555
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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