STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0776Hypothetical protein. (444 aa)    
Predicted Functional Partners:
amb0775
Hypothetical protein.
      
0.814
amb1110
Signal transduction histidine kinase.
  
 
 0.634
amb1281
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
  
 
 0.627
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.586
amb1841
Hypothetical protein.
  
 
 0.557
amb3438
Sensor protein gacS.
  
 
 0.557
amb4146
Signal transduction histidine kinase.
  
 
 0.557
amb0777
Diadenosine tetraphosphatase and related serine/threonine protein phosphatase.
  
  
 0.556
amb0650
Predicted periplasmic ligand-binding sensor domain.
  
  
 0.552
amb0774
ABC-type Na+ transport system; ATPase component.
       0.552
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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