STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0781Predicted transcriptional regulator. (151 aa)    
Predicted Functional Partners:
amb2680
Uncharacterized protein; Conserved in bacteria.
  
     0.701
amb0029
DNA polymerase III; Delta subunit.
  
     0.676
amb2261
Recombinational DNA repair protein; RecF pathway.
  
    0.673
amb4072
Predicted nucleic-acid-binding protein implicated in transcription termination.
 
     0.583
amb3906
Predicted permease.
  
     0.552
amb2682
Hypothetical protein.
  
     0.512
amb0765
Hypothetical protein.
  
     0.510
fliE
Flagellar hook-basal body protein.
  
     0.468
amb3865
Hypothetical protein.
  
     0.466
amb3866
Hypothetical protein.
  
     0.462
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.