Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb0239 | amb1555 | amb0239 | amb1555 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | 0.932 |
| amb0239 | amb1990 | amb0239 | amb1990 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate-flavodoxin oxidoreductase. | 0.961 |
| amb0239 | amb2145 | amb0239 | amb2145 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit. | 0.936 |
| amb0239 | amb2317 | amb0239 | amb2317 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.961 |
| amb0239 | amb2649 | amb0239 | amb2649 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.939 |
| amb0239 | amb2804 | amb0239 | amb2804 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Citrate synthase; Belongs to the citrate synthase family. | 0.959 |
| amb0239 | mdh | amb0239 | amb3957 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Malate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.953 |
| amb0239 | pckG | amb0239 | amb0785 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.938 |
| amb0239 | pdhA | amb0239 | amb2316 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.911 |
| amb1555 | amb0239 | amb1555 | amb0239 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.932 |
| amb1555 | amb1990 | amb1555 | amb1990 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Pyruvate-flavodoxin oxidoreductase. | 0.972 |
| amb1555 | amb2145 | amb1555 | amb2145 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | 627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit. | 0.944 |
| amb1555 | amb2317 | amb1555 | amb2317 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.943 |
| amb1555 | amb2649 | amb1555 | amb2649 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. | 0.915 |
| amb1555 | eno | amb1555 | amb1823 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.986 |
| amb1555 | mdh | amb1555 | amb3957 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Malate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.679 |
| amb1555 | pckG | amb1555 | amb0785 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.917 |
| amb1555 | pdhA | amb1555 | amb2316 | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.917 |
| amb1990 | amb0239 | amb1990 | amb0239 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.961 |
| amb1990 | amb1555 | amb1990 | amb1555 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family. | 0.972 |
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