STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb07952-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase. (267 aa)    
Predicted Functional Partners:
amb3810
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
      0.875
amb2504
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
      0.661
coq7
Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.644
amb2819
Uncharacterized conserved protein.
   
 0.608
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
  
  
 0.590
amb0012
2-polyprenyl-6-methoxyphenol hydroxylase; Related FAD-dependent oxidoreductase.
  
 0.547
amb0259
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase.
  
 0.547
amb0794
Aspartate aminotransferase.
     
 0.544
amb3792
Predicted O-linked N-acetylglucosamine transferase; SPINDLY family.
      0.524
amb0796
Hypothetical protein.
       0.498
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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