Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb0814NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (499 aa)    
Predicted Functional Partners:
amb3952
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.926
amb0801
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.914
amb3953
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Msp2.
   
 
 0.913
amb1383
Acetyl-CoA hydrolase.
  
 
 0.911
amb3950
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
 
 0.909
amb3951
Succinate dehydrogenase, hydrophobic anchor subunit.
   
 
 0.909
amb1684
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.907
amb1321
NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.901
amb0816
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
    
 0.900
amb1487
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
    
 0.900
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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