STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0820Hypothetical protein Rv2567/MT2643. (819 aa)    
Predicted Functional Partners:
amb0821
Transglutaminase-like enzyme; Putative cysteine protease.
 
  
 0.977
amb0819
Uncharacterized protein; Conserved in bacteria.
  
 0.957
amb0817
Uncharacterized protein; Conserved in bacteria.
 
  
 0.939
amb0818
Uncharacterized conserved protein.
 
  
0.784
amb0901
Predicted proteasome-type protease.
 
  
 0.781
amb1470
Hypothetical protein.
  
  
 0.600
amb2393
Transglutaminase-like enzyme, putative cysteine protease.
  
  
 0.568
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.