Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb0309 | amb0634 | NADPH quinone reductase and related Zn-dependent oxidoreductase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.716 |
amb0309 | amb0831 | NADPH quinone reductase and related Zn-dependent oxidoreductase. | Acyl dehydratase. | 0.940 |
amb0309 | amb2591 | NADPH quinone reductase and related Zn-dependent oxidoreductase. | Enoyl-CoA hydratase/carnithine racemase. | 0.773 |
amb0634 | amb0309 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | NADPH quinone reductase and related Zn-dependent oxidoreductase. | 0.716 |
amb0634 | amb0831 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl dehydratase. | 0.947 |
amb0634 | amb2561 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/carnithine racemase. | 0.924 |
amb0634 | amb3583 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl-CoA hydratase/carnithine racemase. | 0.924 |
amb0634 | amb3599 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl-CoA dehydrogenase. | 0.950 |
amb0831 | amb0309 | Acyl dehydratase. | NADPH quinone reductase and related Zn-dependent oxidoreductase. | 0.940 |
amb0831 | amb0634 | Acyl dehydratase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.947 |
amb0831 | amb0832 | Acyl dehydratase. | FAD synthase; Belongs to the ribF family. | 0.742 |
amb0831 | amb0841 | Acyl dehydratase. | Poly-beta-hydroxybutyrate polymerase; phbC homolog. | 0.940 |
amb0831 | amb0843 | Acyl dehydratase. | Dehydrogenase with different specificities; phbB homolog. | 0.957 |
amb0831 | amb2561 | Acyl dehydratase. | Enoyl-CoA hydratase/carnithine racemase. | 0.944 |
amb0831 | amb2591 | Acyl dehydratase. | Enoyl-CoA hydratase/carnithine racemase. | 0.938 |
amb0831 | amb3583 | Acyl dehydratase. | Enoyl-CoA hydratase/carnithine racemase. | 0.944 |
amb0831 | amb3599 | Acyl dehydratase. | Acyl-CoA dehydrogenase. | 0.942 |
amb0831 | amb3725 | Acyl dehydratase. | Poly(3-hydroxyalkanoate) synthetase. | 0.935 |
amb0832 | amb0831 | FAD synthase; Belongs to the ribF family. | Acyl dehydratase. | 0.742 |
amb0841 | amb0831 | Poly-beta-hydroxybutyrate polymerase; phbC homolog. | Acyl dehydratase. | 0.940 |
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