Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb0841Poly-beta-hydroxybutyrate polymerase; phbC homolog. (368 aa)    
Predicted Functional Partners:
amb0843
Dehydrogenase with different specificities; phbB homolog.
 
 
 0.977
amb0518
Poly-beta-hydroxyalkanoate depolymerase.
 
  
 0.943
amb0831
Acyl dehydratase.
 
  
 0.941
amb3725
Poly(3-hydroxyalkanoate) synthetase.
  
  
 
0.929
amb0839
Uncharacterized protein; Conserved in bacteria.
 
   
 0.912
amb0840
Hypothetical protein.
       0.773
mms16
Magnetic particle membrane specific GTPase P16.
 
  
 0.688
amb0842
Acetyl-CoA acetyltransferase; phbA homolog; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.672
amb1121
Magnetic particle membrane specific GTPase P16.
 
  
 0.625
amb2556
Phosphotransacetylase.
 
  
 0.620
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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