Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb0857Predicted transporter component. (376 aa)    
Predicted Functional Partners:
amb0855
Hypothetical protein.
 
   
 0.951
amb0856
Predicted secreted protein.
 
   
 0.949
amb2173
Uncharacterized NAD(FAD)-dependent dehydrogenase.
 
   
 0.751
amb0858
Predicted redox protein; Regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.728
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
   
  
 0.633
amb2674
Cytochrome b subunit of formate dehydrogenase.
  
    0.611
amb2669
Uncharacterized component of anaerobic dehydrogenase.
 
     0.586
amb2172
Cytochrome subunit of sulfide dehydrogenase.
 
   
 0.536
amb2668
Hypothetical protein.
  
     0.532
amb2665
Ferredoxin.
  
    0.528
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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