STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0859Negative regulator of beta-lactamase expression. (226 aa)    
Predicted Functional Partners:
amb3919
Uncharacterized conserved protein; Belongs to the UPF0145 family.
 
    0.874
amb0860
Permease of the drug/metabolite transporter superfamily.
       0.830
amb4248
Predicted phosphotransferase related to Ser/Thr protein kinase.
  
   
 0.610
amb0861
ATPase components of ABC transporters with duplicated ATPase domains.
  
    0.609
amb4247
N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase; eIF-2Bgamma/eIF-2Bepsilon.
  
   
 0.569
anmK
Predicted molecular chaperone distantly related to HSP70-fold metalloprotease; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
   
 0.532
amb4488
Permease of the major facilitator superfamily.
 
   
 0.478
amb0327
Uncharacterized protein; Conserved in bacteria.
 
     0.426
amb1842
Beta-glucosidase-related glycosidase.
     
 0.422
amb3341
Uncharacterized protein conserved in bacteria; Belongs to the UPF0262 family.
  
     0.401
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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