STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0863Hypothetical protein. (114 aa)    
Predicted Functional Partners:
amb3476
Membrane-fusion protein; Multidrug resistance efflux pump.
 
     0.671
amb4058
ABC-type protease/lipase transport system, ATPase and permease components.
 
     0.670
amb3061
Outer membrane protein.
  
     0.668
amb3159
Membrane-fusion protein.
 
     0.668
amb4057
Membrane-fusion protein.
 
     0.662
amb2378
Membrane-fusion protein.
 
     0.659
amb0862
Hypothetical protein.
       0.655
amb3157
Outer membrane protein.
  
     0.599
amb3475
ABC-type protease/lipase transport system, ATPase and permease components.
 
     0.588
amb3158
Protease secretion ATP-binding protein prtD.
 
     0.552
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.