STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0864Hypothetical protein. (190 aa)    
Predicted Functional Partners:
amb1792
Carbonic anhydrase/acetyltransferase; Isoleucine patch superfamily.
    
 
 0.649
amb2675
Carbonic anhydrase/acetyltransferase; Isoleucine patch superfamily.
    
 
 0.649
amb0071
SAM-dependent methyltransferase.
  
     0.630
apt
Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.597
amb0863
Hypothetical protein.
       0.550
amb3788
Fe-S oxidoreductase.
  
     0.503
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
    0.501
amb0070
Predicted Fe-S oxidoreductase.
  
     0.481
amb1426
Hypothetical protein.
 
  
 0.481
amb2015
Phenylacetyl CoA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.477
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.