STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb0883Cytochrome c-552 precursor. (227 aa)    
Predicted Functional Partners:
amb4089
Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.874
amb4424
Cytochrome C4 precursor.
 
   
 0.785
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 
 0.769
amb2225
Cytochrome b subunit of the bc complex.
 
 
 0.614
amb3078
ABC-type multidrug transport system, ATPase component.
 
     0.579
mamH
Permease of the major facilitator superfamily; Required for correct biomineralization of the magnetosome; probably transports some form of iron. Partially functionally redundant with MamZ; Belongs to the major facilitator superfamily.
  
     0.560
amb3076
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.554
amb0882
Cytochrome c-552 precursor.
     
 0.546
rnfH
Uncharacterized protein conserved in bacteria; Belongs to the UPF0125 (RnfH) family.
  
     0.535
amb3575
Hypothetical protein.
  
 
 0.517
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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