STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0937High-affinity Fe2+/Pb2+ permease. (391 aa)    
Predicted Functional Partners:
amb0939
Uncharacterized protein; Probably involved in high-affinity Fe2+ transport.
 
  
 0.945
amb0940
Uncharacterized protein; Probably involved in high-affinity Fe2+ transport.
 
  
 0.922
amb0938
Polyferredoxin.
 
    0.917
amb4411
Uncharacterized protein probably involved in high-affinity Fe2+ transport.
 
  
 0.856
amb0936
Hypothetical protein.
       0.773
amb4413
Polyferredoxin.
 
    0.634
amb1681
High-affinity Fe2+/Pb2+ permease.
  
  
 
0.508
amb0705
Predicted iron-dependent peroxidase.
  
  
 0.503
amb1059
Polyferredoxin.
 
    0.473
amb0941
Carbohydrate-selective porin.
       0.470
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.