Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb0955 | mamF | amb0955 | amb0953 | Hypothetical protein. | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | 0.443 |
| amb0955 | mamG | amb0955 | amb0954 | Hypothetical protein. | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | 0.457 |
| amb0955 | mms6 | amb0955 | amb0956 | Hypothetical protein. | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | 0.458 |
| amb0955 | mmsF | amb0955 | amb0957 | Hypothetical protein. | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | 0.432 |
| mamF | amb0955 | amb0953 | amb0955 | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | Hypothetical protein. | 0.443 |
| mamF | mamG | amb0953 | amb0954 | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | 0.832 |
| mamF | mms6 | amb0953 | amb0956 | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | 0.704 |
| mamG | amb0955 | amb0954 | amb0955 | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | Hypothetical protein. | 0.457 |
| mamG | mamF | amb0954 | amb0953 | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | 0.832 |
| mamG | mmsF | amb0954 | amb0957 | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | 0.503 |
| mms6 | amb0955 | amb0956 | amb0955 | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | Hypothetical protein. | 0.458 |
| mms6 | mamF | amb0956 | amb0953 | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | Hypothetical protein; Plays a role in regulating magnetite crystal size; partially redundant function with MmsF. | 0.704 |
| mms6 | mmsF | amb0956 | amb0957 | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | 0.898 |
| mmsF | amb0955 | amb0957 | amb0955 | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | Hypothetical protein. | 0.432 |
| mmsF | mamG | amb0957 | amb0954 | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | Bacterial magnetic particle specificiron-binding protein; Plays a role in regulating magnetite crystal size. Belongs to the magnetosome MamG (TC 9.B.95) protein family. | 0.503 |
| mmsF | mms6 | amb0957 | amb0956 | Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence. | Bacterial magnetic particle specific iron-binding protein; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds Fe(3+) and Fe(2+) (Probable). May play a role in nucleation of magnetite crystal formation (Probable). May help control production of crystals with a specific morphology (Probable). Greatly improves the formation of magnetosome-like magnetite crystals in vitro. Isolated short protein, probably residues 75-133, binds up to 18 Fe(3+) per monomer and self-assembles into micelles about 21-26 nm in diameter; the C-terminal 21 [...] | 0.898 |