STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0959Uncharacterized membrane-bound protein. (469 aa)    
Predicted Functional Partners:
amb0958
Uncharacterized protein; Conserved in bacteria.
     
 0.907
mmsF
Hypothetical protein; Plays a major role in synthesis of cubooctahedral magnetite crystals by controlling crystal growth and morphology after nucleation. Has a partially redundant function with MamF (By similarity). When overexpressed in E.coli the soluble protein self assembles into shells of about 36 nm. This protein mediates the formation of magnetite nanoparticles from a solution of Fe(2+) and Fe(3+) sulfate; the crystals are larger and lack alternative iron oxide/oxyhydroxide species seen in the protein's absence.
     
 0.773
amb4421
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
     0.733
amb4151
Hypothetical protein.
  
   
 0.704
amb0601
Hypothetical protein.
  
     0.703
amb4492
Kinesin-like protein K39.
  
  
 0.684
amb2741
Uncharacterized protein; Conserved in bacteria.
  
     0.661
amb0421
Inactivated superfamily I helicase.
  
     0.660
amb3864
Hypothetical protein.
  
     0.631
amb3051
Transcriptional regulator.
  
     0.626
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.