STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0979Hypothetical protein. (221 aa)    
Predicted Functional Partners:
amb1110
Signal transduction histidine kinase.
  
 
 0.783
amb1112
Signal transduction histidine kinase.
  
 
 0.748
amb1841
Hypothetical protein.
  
 
 0.704
amb3438
Sensor protein gacS.
  
 
 0.704
amb4146
Signal transduction histidine kinase.
  
 
 0.704
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.662
amb3654
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.519
amb2205
Signal transduction histidine kinase.
  
 
 0.499
amb0620
Signal transduction histidine kinase.
  
 
 0.486
amb2932
Methylase of chemotaxis methyl-accepting protein.
  
 
 0.481
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.