STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb0996CheY-like receiver. (117 aa)    
Predicted Functional Partners:
amb3893
Uncharacterized protein conserved in bacteria.
  
     0.694
amb2505
Hypothetical protein.
  
    0.688
amb0334
Serine phosphatase RsbU; Regulator of sigma subunit.
 
  
 0.618
amb0495
DNA polymerase III; Gamma/tau subunits.
  
     0.613
amb3189
Hypothetical protein.
  
     0.583
amb1432
Signal transduction histidine kinase.
  
 
 0.575
amb3188
Hypothetical protein.
  
     0.567
amb3039
Hypothetical protein.
 
 
   0.555
amb1110
Signal transduction histidine kinase.
  
 
 0.538
amb1841
Hypothetical protein.
  
 
 0.538
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.