Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb0602 | amb1002 | amb0602 | amb1002 | Outer membrane protein and related peptidoglycan-associated protein. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.654 |
| amb0602 | amb1004 | amb0602 | amb1004 | Outer membrane protein and related peptidoglycan-associated protein. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.654 |
| amb0602 | amb1708 | amb0602 | amb1708 | Outer membrane protein and related peptidoglycan-associated protein. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.751 |
| amb0602 | amb3055 | amb0602 | amb3055 | Outer membrane protein and related peptidoglycan-associated protein. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.655 |
| amb0602 | amb3878 | amb0602 | amb3878 | Outer membrane protein and related peptidoglycan-associated protein. | Sensor protein gacS. | 0.518 |
| amb1002 | amb0602 | amb1002 | amb0602 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Outer membrane protein and related peptidoglycan-associated protein. | 0.654 |
| amb1002 | amb1004 | amb1002 | amb1004 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.710 |
| amb1002 | amb1005 | amb1002 | amb1005 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Uncharacterized conserved protein. | 0.639 |
| amb1002 | amb1007 | amb1002 | amb1007 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Predicted Co/Zn/Cd cation transporters. | 0.620 |
| amb1002 | amb1708 | amb1002 | amb1708 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.793 |
| amb1002 | amb3055 | amb1002 | amb3055 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.692 |
| amb1002 | amb3878 | amb1002 | amb3878 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Sensor protein gacS. | 0.565 |
| amb1002 | limJ | amb1002 | amb1003 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | FraH protein; Regulates the dynamic behavior of MamK filaments; paralog MamJ also promotes MamK turnover. At least one other protein besides MamJ and LimJ is required for MamK turnover. Might connect magnetosomes to MamK filaments (Probable). | 0.689 |
| amb1002 | mamK | amb1002 | amb0965 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Actin-like ATPase; Protein with ATPase activity which forms dynamic cytoplasmic filaments (probably with paralog MamK-like) that organize magnetosomes into long chains running parallel to the long axis of the cell (Probable). Turnover of MamK filaments is probably promoted by MamK-like, which provides a monomer pool. Forms twisted filaments in the presence of ATP or GTP. Serves to close gaps between magnetosomes in the chain. Interaction with MCP10 is involved in controlling the response to magnetic fields, possibly by controlling flagellar rotation. Expression in E.coli yields a filam [...] | 0.604 |
| amb1002 | truA | amb1002 | amb0241 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.548 |
| amb1004 | amb0602 | amb1004 | amb0602 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Outer membrane protein and related peptidoglycan-associated protein. | 0.654 |
| amb1004 | amb1002 | amb1004 | amb1002 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.710 |
| amb1004 | amb1005 | amb1004 | amb1005 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Uncharacterized conserved protein. | 0.726 |
| amb1004 | amb1007 | amb1004 | amb1007 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Predicted Co/Zn/Cd cation transporters. | 0.633 |
| amb1004 | amb1708 | amb1004 | amb1708 | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain. | 0.745 |
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