Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
amb1011 | amb1012 | amb1011 | amb1012 | Hypothetical protein. | Cation transport ATPase. | 0.572 |
amb1011 | amb1013 | amb1011 | amb1013 | Hypothetical protein. | Co/Zn/Cd efflux system component. | 0.540 |
amb1012 | amb1011 | amb1012 | amb1011 | Cation transport ATPase. | Hypothetical protein. | 0.572 |
amb1012 | amb1013 | amb1012 | amb1013 | Cation transport ATPase. | Co/Zn/Cd efflux system component. | 0.811 |
amb1012 | amb1014 | amb1012 | amb1014 | Cation transport ATPase. | Uncharacterized conserved protein. | 0.418 |
amb1013 | amb1011 | amb1013 | amb1011 | Co/Zn/Cd efflux system component. | Hypothetical protein. | 0.540 |
amb1013 | amb1012 | amb1013 | amb1012 | Co/Zn/Cd efflux system component. | Cation transport ATPase. | 0.811 |
amb1013 | amb1014 | amb1013 | amb1014 | Co/Zn/Cd efflux system component. | Uncharacterized conserved protein. | 0.443 |
amb1013 | cysC | amb1013 | amb2212 | Co/Zn/Cd efflux system component. | NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate. | 0.410 |
amb1014 | amb1012 | amb1014 | amb1012 | Uncharacterized conserved protein. | Cation transport ATPase. | 0.418 |
amb1014 | amb1013 | amb1014 | amb1013 | Uncharacterized conserved protein. | Co/Zn/Cd efflux system component. | 0.443 |
cysC | amb1013 | amb2212 | amb1013 | NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate. | Co/Zn/Cd efflux system component. | 0.410 |