Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb0395 | amb1019 | Phage-related protein; Tail component. | Hypothetical protein. | 0.603 |
amb0395 | amb1028 | Phage-related protein; Tail component. | Hypothetical protein. | 0.592 |
amb0395 | amb1029 | Phage-related protein; Tail component. | Serine/threonine protein kinase. | 0.575 |
amb0395 | amb2118 | Phage-related protein; Tail component. | Hypothetical protein. | 0.415 |
amb0395 | amb2123 | Phage-related protein; Tail component. | Integrase; Belongs to the 'phage' integrase family. | 0.715 |
amb0395 | amb2127 | Phage-related protein; Tail component. | Integrase; Belongs to the 'phage' integrase family. | 0.722 |
amb1019 | amb0395 | Hypothetical protein. | Phage-related protein; Tail component. | 0.603 |
amb1019 | amb1029 | Hypothetical protein. | Serine/threonine protein kinase. | 0.782 |
amb1019 | amb1192 | Hypothetical protein. | Phage-related protein; Tail component. | 0.606 |
amb1019 | amb1523 | Hypothetical protein. | Hypothetical protein. | 0.492 |
amb1019 | amb2118 | Hypothetical protein. | Hypothetical protein. | 0.476 |
amb1019 | amb2123 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.659 |
amb1019 | amb2127 | Hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.638 |
amb1019 | amb3252 | Hypothetical protein. | Hypothetical protein. | 0.457 |
amb1019 | amb4287 | Hypothetical protein. | Hypothetical protein; Belongs to the 'phage' integrase family. | 0.437 |
amb1028 | amb0395 | Hypothetical protein. | Phage-related protein; Tail component. | 0.592 |
amb1028 | amb1029 | Hypothetical protein. | Serine/threonine protein kinase. | 0.948 |
amb1028 | amb1192 | Hypothetical protein. | Phage-related protein; Tail component. | 0.595 |
amb1028 | amb1523 | Hypothetical protein. | Hypothetical protein. | 0.480 |
amb1028 | amb2118 | Hypothetical protein. | Hypothetical protein. | 0.462 |
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