Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1042CheY-like receiver. (331 aa)    
Predicted Functional Partners:
amb1043
Signal transduction histidine kinase.
 
 
 
 0.935
amb1050
Signal transduction histidine kinase.
 
 
 
 0.878
amb1044
CheY-like receiver.
 
    
0.838
amb1872
PAS/PAC domain.
 
 
 0.788
amb2954
Signal transduction histidine kinase.
 
 
 
 0.726
amb1466
Predicted ATPase.
  
 
 0.707
amb1947
Predicted ATPase.
  
 
 0.707
amb2936
Predicted ATPase.
  
 
 0.707
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
  
 
 0.706
amb1110
Signal transduction histidine kinase.
  
 
 0.697
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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