STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1048Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain. (387 aa)    
Predicted Functional Partners:
amb1050
Signal transduction histidine kinase.
 
 
 
 0.952
amb2954
Signal transduction histidine kinase.
 
 
 
 0.818
amb1043
Signal transduction histidine kinase.
 
 
 
 0.807
amb1047
Hypothetical protein.
       0.773
amb1049
ABC-type phosphate/phosphonate transport system; Periplasmic component.
       0.727
amb1432
Signal transduction histidine kinase.
 
 
 0.625
amb4146
Signal transduction histidine kinase.
 
 
 0.603
amb1110
Signal transduction histidine kinase.
 
 
 0.591
amb2293
Signal transduction histidine kinase.
 
 
 0.578
amb1967
Signal transduction histidine kinase.
 
 
 0.577
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.