Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb1050Signal transduction histidine kinase. (645 aa)    
Predicted Functional Partners:
amb0650
Predicted periplasmic ligand-binding sensor domain.
 
 
 0.953
amb2930
Sensor protein barA.
 
 
 0.949
amb1432
Signal transduction histidine kinase.
 
 
 0.948
amb1048
Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain.
 
 
 
 0.947
amb2165
Signal transduction histidine kinase.
 
 
0.946
amb1873
Signal transduction histidine kinase.
 
 
 0.945
amb1841
Hypothetical protein.
 
 
 0.943
amb4146
Signal transduction histidine kinase.
 
 
 0.943
amb1110
Signal transduction histidine kinase.
  
 
 0.936
amb3438
Sensor protein gacS.
  
 
 0.931
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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