Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| amb0663 | amb1055 | Thioredoxin reductase. | Hypothetical protein. | 0.415 |
| amb0663 | amb1990 | Thioredoxin reductase. | Pyruvate-flavodoxin oxidoreductase. | 0.552 |
| amb0663 | amb2879 | Thioredoxin reductase. | Selenocysteine lyase. | 0.943 |
| amb1055 | amb0663 | Hypothetical protein. | Thioredoxin reductase. | 0.415 |
| amb1055 | amb1263 | Hypothetical protein. | Predicted metal-sulfur cluster biosynthetic enzyme. | 0.658 |
| amb1055 | amb1564 | Hypothetical protein. | NifQ protein. | 0.768 |
| amb1055 | amb1850 | Hypothetical protein. | SRPI protein. | 0.643 |
| amb1055 | amb1949 | Hypothetical protein. | Phenolpthiocerol synthesis polyketide synthase ppsA. | 0.490 |
| amb1055 | amb1990 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.494 |
| amb1055 | amb2878 | Hypothetical protein. | NifU homolog involved in Fe-S cluster formation. | 0.836 |
| amb1055 | amb2879 | Hypothetical protein. | Selenocysteine lyase. | 0.775 |
| amb1055 | amb3026 | Hypothetical protein. | Uncharacterized conserved protein; Belongs to the HesB/IscA family. | 0.476 |
| amb1055 | amb3027 | Hypothetical protein. | NifU homolog involved in Fe-S cluster formation; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.769 |
| amb1263 | amb1055 | Predicted metal-sulfur cluster biosynthetic enzyme. | Hypothetical protein. | 0.658 |
| amb1263 | amb1564 | Predicted metal-sulfur cluster biosynthetic enzyme. | NifQ protein. | 0.663 |
| amb1263 | amb2878 | Predicted metal-sulfur cluster biosynthetic enzyme. | NifU homolog involved in Fe-S cluster formation. | 0.744 |
| amb1263 | amb2879 | Predicted metal-sulfur cluster biosynthetic enzyme. | Selenocysteine lyase. | 0.605 |
| amb1263 | amb3027 | Predicted metal-sulfur cluster biosynthetic enzyme. | NifU homolog involved in Fe-S cluster formation; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.668 |
| amb1564 | amb1055 | NifQ protein. | Hypothetical protein. | 0.768 |
| amb1564 | amb1263 | NifQ protein. | Predicted metal-sulfur cluster biosynthetic enzyme. | 0.663 |
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