Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1061Nodulation protein noeE. (433 aa)    
Predicted Functional Partners:
amb1062
ABC-type polysaccharide/polyol phosphate transport system; ATPase component.
     
 0.786
amb1063
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
     
 0.782
amb1064
Hypothetical protein.
       0.495
amb1065
Predicted membrane protein; Involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.
       0.491
amb1708
Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain.
 
 
 
 0.491
amb1066
NTP pyrophosphohydrolase; Including oxidative damage repair enzyme.
       0.471
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.