Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb1062ABC-type polysaccharide/polyol phosphate transport system; ATPase component. (427 aa)    
Predicted Functional Partners:
amb1063
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
 0.999
amb1071
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
 
 0.990
amb1452
Hypothetical protein.
  
  
 0.807
amb1061
Nodulation protein noeE.
     
 0.786
amb1067
Glycosyltransferase involved in cell wall biogenesis.
 
  
 0.761
amb1081
Glycosyltransferase.
 
 
 0.736
amb1074
Predicted glycosyltransferase.
 
  
 0.664
amb0037
Xanthan biosynthesis protein xanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.646
amb1083
Glycosyltransferase.
 
 
 0.625
amb1079
Glycosyltransferase.
 
 
 0.619
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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