STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1070ABC-type polysaccharide/polyol phosphate transport system; ATPase component. (244 aa)    
Predicted Functional Partners:
amb1071
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
 
 
 0.994
amb1063
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
 
 
 0.985
amb1452
Hypothetical protein.
  
  
 0.807
amb1081
Glycosyltransferase.
 
 
 0.745
amb1069
Nucleoside-diphosphate-sugar epimerase.
 
  
 0.738
amb1068
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
  
  
 0.679
amb1079
Glycosyltransferase.
 
 
 0.650
amb0037
Xanthan biosynthesis protein xanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.646
amb1074
Predicted glycosyltransferase.
 
  
 0.635
amb1083
Glycosyltransferase.
 
 
 0.605
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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