Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1075Hypothetical protein. (915 aa)    
Predicted Functional Partners:
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
     
 0.536
amb0521
Glutamate synthase [NADPH] large chain precursor.
   
  
 0.515
amb1713
Sulfatase modifying factor 1 precursor.
  
   0.487
amb1714
Uncharacterized conserved protein.
  
   0.487
amb1721
Sulfatase modifying factor 2 precursor.
  
   0.487
amb2565
Uncharacterized conserved protein.
  
   0.487
amb2663
Uncharacterized conserved protein.
  
   0.487
amb1074
Predicted glycosyltransferase.
     
 0.486
rpoZ
DNA-directed RNA polymerase, subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 
 0.468
amb1847
Cystathionine beta-lyase.
  
  
 0.465
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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