Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb1079Glycosyltransferase. (386 aa)    
Predicted Functional Partners:
amb1078
Glycosyltransferase; Involved in cell wall biogenesis.
  
 0.859
amb1080
Glycosyltransferase; Involved in cell wall biogenesis.
 
   
 0.807
amb1077
GDP-D-mannose dehydratase; Nucleoside-diphosphate-sugar epimerase.
 
  
 0.784
amb1081
Glycosyltransferase.
 
   
0.751
amb1083
Glycosyltransferase.
 
    
0.738
amb1082
Glycosyltransferase; Involved in cell wall biogenesis.
  
    0.664
amb1070
ABC-type polysaccharide/polyol phosphate transport system; ATPase component.
 
 
 0.650
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.627
amb1062
ABC-type polysaccharide/polyol phosphate transport system; ATPase component.
 
 
 0.619
amb1076
GDP-D-mannose dehydratase.
  
 0.615
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.