STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1079Glycosyltransferase. (386 aa)    
Predicted Functional Partners:
amb1078
Glycosyltransferase; Involved in cell wall biogenesis.
  
 0.861
amb1080
Glycosyltransferase; Involved in cell wall biogenesis.
   
 0.808
amb1077
GDP-D-mannose dehydratase; Nucleoside-diphosphate-sugar epimerase.
 
  
 0.781
amb1081
Glycosyltransferase.
 
  
0.752
amb1083
Glycosyltransferase.
 
    
0.739
amb1082
Glycosyltransferase; Involved in cell wall biogenesis.
  
  
 0.665
amb1070
ABC-type polysaccharide/polyol phosphate transport system; ATPase component.
 
 
 0.654
amb1062
ABC-type polysaccharide/polyol phosphate transport system; ATPase component.
 
 
 0.623
amb1076
GDP-D-mannose dehydratase.
  
 0.609
amb1063
ABC-type polysaccharide/polyol phosphate export systems; Permease component.
 
  
 0.608
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.