STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb1086Hypothetical protein. (281 aa)    
Predicted Functional Partners:
amb1087
Hypothetical protein.
       0.778
amb1085
Uncharacterized protein with a C-terminal OMP domain.
       0.739
amb1081
Glycosyltransferase.
   
 
 0.583
amb4313
Predicted esterase.
     
 0.577
amb1083
Glycosyltransferase.
   
 
 0.573
amb1079
Glycosyltransferase.
   
 
 0.542
amb1148
Hypothetical protein.
    
 0.509
amb1084
Hypothetical protein.
       0.439
amb0851
Uncharacterized protein; Possibly involved in aromatic compounds catabolism.
  
  
 0.434
amb2378
Membrane-fusion protein.
  
     0.434
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.