Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb1104Predicted signal transduction protein; Containing a membrane domain. (682 aa)    
Predicted Functional Partners:
amb2928
Bacteriophytochrome; Light-regulated signal transduction histidine kinase.
 
      0.839
amb1105
ABC-type phosphate/phosphonate transport system; Periplasmic component.
       0.780
amb4013
Signal transduction histidine kinase.
  
 
 0.770
amb1106
EAL domain.
 
 
0.767
amb4144
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
  
 0.744
amb2313
Signal transduction histidine kinase.
 
 
 0.658
amb3447
Signal transduction histidine kinase.
 
    
 0.648
amb1109
Sensor protein fixL.
  
 
 0.610
amb1110
Signal transduction histidine kinase.
 
 
 0.596
amb1918
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
0.592
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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